J. Liebscher et al.
FULL PAPER
5:1) to give the desired product (120 mg, 0.21 mmol, 60%) as a
CH2), 1.20 (s, 9 H, CH3) ppm. 13C NMR (CDCl3/CD3OD): δ =
172.9, 163.8, 150.5, 140.1, 123.8, 102.7, 86.5, 85.8, 79.8, 70.6, 65.8,
violet foam. Rf = 0.53 (CH2Cl2/MeOH, 5:1). M.p. 85–88 °C. 1H
NMR (300 MHz, CD3OD): δ = 7.97 (d, J = 8.1 Hz, 1 H, 6-H), 61.0, 52.8, 51.9, 34.4, 31.6, 27.7, 27.2, 27.2 (CH2), 27.7 (CH3), 31.6
7.88 (s, 1 H, CH), 7.78 (t, J = 13.5 Hz, 2 H, CH), 7.32 (d, J =
7.5 Hz, 4 H, ArH), 7.18 (m, 2 H, ArH), 7.08 (d, J = 7.5 Hz, 2 H,
(CH2), 34.4 (CH2), 51.9 (OCH3), 52.8 (CH2), 61.0 [CH2(C5Ј)], 65.8
[CH(C2Ј)], 70.6 [CH(C3Ј)], 79.8 (Cq), 85.8 [CH(C1Ј)], 86.5
ArH), 6.49 (m, 2 H, 1Ј-H, CH), 6.15 (d, J = 13.5 Hz, 2 H, CH), [CH(C4Ј)], 102.7 (CH-5), 123.8 (CH), 140.1 (CH-6), 150.5 (C-2),
6.06 (d, J = 13.5 Hz, 2 H, CH), 5.65 (d, J = 8.1 Hz, 1 H, 5-H),
163.8 (C-4), 172.9 (CONH) ppm. HRMS (ESI): calcd. for
5.29 (t, J = 6.6 Hz, 1 H, 2Ј-H), 4.52 (m, 1 H, 3Ј-H), 4.36 (s, 2 H, C23H32N7O10 [M + H]+ 566.2211; found 566.2216.
CH2O), 4.19 (m, 1 H, 4Ј-H), 3.92 (m, 2 H, 5Ј-H), 3.49 (s, 3 H),
2.17 [t, J = 5.1 Hz, 2 H, CH2(CO)N], 1.80–1.59 (m, 18 H, CH2,
2Ј-Triazolyl-2Ј-deoxyuridine 3g
CH3) ppm. 13C NMR (75 MHz, CD3OD): δ = 174.2, 173.0, 172.9,
163.9, 162.1, 153.1, 152.7, 150.6, 142.4, 141.6, 140.8, 140.5, 128.9,
128.7, 128.5, 125.3, 125.2, 125.0, 122.0, 121.9, 111.4, 110.7, 110.3,
107.3, 103.3, 103.0, 102.7, 86.4, 86.3, 80.6, 77.2, 73.1, 70.4, 65.7,
61.0, 35.8, 34.5, 30.8, 29.4, 27.6, 26.8, 26.2, 25.1, 24.8 ppm. HRMS
(ESI): calcd. for C44H51N8O6 [M + H]+ 787.3932; found 787.3926.
Method B: To a mixture of a solution of 2Ј-azido-2Ј-deoxyuridine
in THF (0.5 , 2.75 mL, 1.37 mmol), a solution of CuSO4·H2O
(1 , 275µL, 0.14 mmol) and an aqueous solution of sodium as-
corbate in H2O (1 , 400 µL, 0.28 mmol) was added N-(prop-2-
ynyl)biotinamide (390 mg, 1.37 mmol), and the mixture was stirred
at room temp. for 48 h. The solvent was removed, and the residue
was crystallized from H2O to give the desired product (12 mg,
0.02 mmol, 2%) as a white foam.
2Ј-Triazolyl-2Ј-deoxyuridine 3e: To a solution of 2Ј-azido-2Ј-deoxy-
uridine in THF (0.5 , 1.00 mL, 0.50 mmol) were added an aque-
ous solution of CuSO4·H2O (1 , 100µL, 0.1 mmol), a solution of
sodium ascorbate in H2O (1 , 200 µL, 0.20 mmol) and propargyl-
β--peracetylglucose (190 mg, 0.50 mmol), and the reaction mix-
ture was stirred at room temp. for 48 h. The solvent was removed,
and the residue was purified by column chromatography (CH2Cl2/
Method C: A mixture of a solution of 2Ј-azido-2Ј-deoxyuridine in
THF (0.5 , 1.30 mL, 0.35 mmol), N-(prop-2-ynyl)biotinamide
(95 mg, 0.35 mmol) and TBTA (35 mg, 0.07 mmol) was degassed
under argon in an ultrasonic bath. Afterwards, a solution of
CuSO4·H2O in H2O (1 , 68 µL, 0.07 mmol) and a solution of so-
dium ascorbate in H2O (1 , 136 µL, 0.14 mmol) were added, and
the reaction mixture was stirred at room temp. for 1 h. The solvent
was evaporated under reduced pressure, and the residue was crys-
tallized from MeOH to give the desired product (110 mg,
0.20 mmol, 57%) as a white foam. Rf = 0.01 (EtOAc/MeOH. 5:1).
MeOH, 10:1
Ǟ 5:1) to give the desired product (255 mg,
0.39 mmol, 78%) as a white foam. Rf = 0.56 (CH2Cl2/MeOH, 5:1).
1
M.p. 118–121 °C. H NMR (300 MHz, CDCl3): δ = 9.83 (s, 1 H,
NH), 7.99 (s, 1 H, 6-H), 7.95 (s, 1 H, CH), 6.52 (d, J = 7.5 Hz, 1
H, 1Ј-H), 5.69 (d, J = 6.0 Hz, 1 H, 5-H), 5.35 (m, 1 H, 2Ј-H), 5.27
(t, J = 9.6 Hz, 1 H, CH), 5.05 (t, J = 9.6 Hz, 1 H, CH), 4.87 (t, J
= 9.6 Hz, 1 H, CH), 4.63 (m, 1 H, 3Ј-H), 4.55 (m, 2 H, CH2), 4.21
(m, 3 H, 4Ј-H, 5Ј-H), 3.75 (m, 2 H, CH2), 2.04 (s, 3 H, CH3), 1.97
(s, 6 H, CH3), 1.84 (s, 3 H, CH3) ppm. 13C NMR (75 MHz,
CDCl3): δ = 171.0, 170.7, 169.9, 169.5, 163.6, 150.4, 142.6, 140.3,
125.8, 103.0, 98.4, 86.9, 86.2, 77.3, 72.6, 71.6, 70.9, 70.8, 67.9, 66.0,
65.9, 61.6, 20.6, 20.5, 20.4 ppm. HRMS (ESI): calcd. for
C26H32O15N5 [M – H]+ 654.1895; found 654.1894.
1
M.p. 262–268 °C (decomp.). H NMR ([D6]DMSO): δ = 11.31 (s,
1 H, NH), 7.92 (d, J = 8.0 Hz, 1 H, 6-H), 7.83 (s, 1 H, NCH), 6.35
(d, J = 9.0 Hz, 1 H, 1Ј-H), 5.61 (d, J = 8.0 Hz, 1 H, 5-H), 5.25 (m,
1 H, 2Ј-H), 4.31 (m, 1 H, 3Ј-H), 4.24 (m, 2 H, CH2), 4.01 (m, 2 H,
4Ј-H, CH), 3.57 (m, 2 H, 5Ј-H), 3.01 (m, 1 H, CH), 2.65 (m, 2 H,
CH2), 2.00 [m, 2 H, CH2(CO)N], 1.21–1.50 (m, 8 H, CH2) ppm.
13C NMR ([D6]DMSO): δ = 172.1, 162.9, 150.4, 140.1, 123.8,
102.3, 85.7, 85.6, 69.1, 64.7, 61.0, 60.9, 59.2, 55.3, 38.2, 30.4, 28.2,
27.9, 25.1 ppm. HRMS (ESI): calcd. for C22H29N8O732S [M + H]
2Ј-Triazolyl-2Ј-deoxyuridine 3f
+
549.1880; found 549.1895.
Method B: To a solution of 2Ј-azido-2Ј-deoxyuridine in THF
(0.5 , 1.00 mL, 0.50 mmol) were added an aqueous solution of
CuSO4·H2O (1 , 100µL, 0.1 mmol), a solution of sodium ascorb-
ate in H2O (1 , 200 µL, 0.20 mmol) and (S)-Nα-Boc-Nδ-propar-
gylglutamine methyl ester (150 mg, 0.50 mmol), and the reaction
mixture was stirred at room temp. for 48 h. The solvent was re-
moved, and the residue was purified by column chromatography
(CH2Cl2/MeOH, 10:1 Ǟ 5:1). HPLC spectra showed some traces
of the desired product, but these could not be isolated.
Membrane Incorporation of Lipophilic Nucleosides: 1-Palmitoyl-2-
oleoyl-sn-glycero-3-phosphocholine (POPC), 1-[D31]palmitoyl-2-
oleoyl-sn-glycero-3-phosphocholine ([D31]POPC) and cholesterol
were purchased from Avanti Polar Lipids (Alabaster, AL) and used
without further purification. The samples for 2H, 31P and 1H
NOESY NMR measurements were prepared as described pre-
viously.[19] All samples had a water content of 40 wt.-%. 31P NMR
spectra were obtained with a Bruker DRX600 NMR spectrometer
(Bruker BioSpin, Rheinstetten, Germany) at a resonance frequency
of 242.8 MHz for 31P by using a Hahn-echo pulse sequence with a
Method C: A mixture of a solution of 2Ј-azido-2Ј-deoxyuridine in
THF (0.5 , 2.00 mL, 1.00 mmol), methyl (S)-2-(tert-butoxy- 90° pulse and a duration of 11 µs, a Hahn-echo delay of 50 µs, a
carbonylamino)-5-oxo-5-(prop-2-ynylamino)pentanoate (230 mg, spectral width of 100 kHz, and a recycle delay of 3 s. Continuous-
0.75 mmol) and TBTA (75 mg, 0.15 mmol) was degassed under ar-
gon in an ultrasonic bath. Afterwards, a solution of CuSO4·H2O
in H2O (1 , 150µL, 0.15 mmol) and a solution of sodium ascorb-
ate in H2O (1 , 300 µL, 0.30 mmol) were added, and the reaction
mixture was stirred at room temp. for 1 h. The solvent was evapo-
rated under reduced pressure, and the residue was purified by col-
umn chromatography (EtOAc/MeOH, 10:1 Ǟ 5:1) to give the de-
sired product (210 mg, 0.37 mmol, 49%) as a white foam. Rf = 0.31
(EtOAc/MeOH, 5:1). M.p. 118–121 °C. 1H NMR (CDCl3/
wave proton-decoupling was applied during signal acquisition.
Spectral simulations of the 31P NMR line shape were carried out
to obtain the chemical shift anisotropy (∆σ) by using a program
written in Mathcad 2001 (MathSoft Engineering & Education Inc.,
2
Cambridge, MA). H NMR spectra were recorded with a Bruker
Avance750 NMR spectrometer at
a resonance frequency of
115.1 MHz for 2H by using a solids probe with a 5 mm solenoid
coil. The 2H NMR spectra were obtained with a quadrupolar echo
sequence and a relaxation delay of 1 s. The two 3 µs π/2 pulses were
CD3OD): δ = 7.92 (d, J = 8.0 Hz, 1 H, 6-H), 7.79 (s, 1 H, NCH), separated by a 60 µs delay. 2H NMR spectra were depaked, and
6.40 (d, J = 9.0 Hz, 1 H, 1Ј-H), 5.59 (d, J = 8.0 Hz, 1 H, 5-H), 5.19 order parameters for each methylene group in the chain were deter-
2
(m, 1 H, 2Ј-H), 4.38 (s, 1 H, 3Ј-H), 4.24 (m, 2 H, CH2), 3.72 (m, 2
H, 5Ј-H), 3.54 (s, 1 H, CH), 2.11 (m, 2 H, CH2), 1.80 (m, 2 H,
mined as described previously.[54] For the H NMR T1Z relaxation
studies, a phase-sensitive inversion recovery quadrupolar echo-
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Eur. J. Org. Chem. 2010, 1579–1586