Inhibitors of Mitochondrial Respiration Complex III
Journal of Medicinal Chemistry, 2006, Vol. 49, No. 15 4765
K. Preparation of N-phenoxypyrimidinyloxyphenyl-3-formylamino-
2-hydroxybenzamides and related compounds as pesticides. DE
19710609, 1998. (c) Imamura, K.; Mitomo, K.; Yamada, N.;
Yamamoto, K.; Teraoka, T.; Sakanaka, O.; Kurihara, H.; Taniguchi,
M. Preparation of picolinamide derivatives and pest controllers
containing the same as the active ingredient. WO 2000026191, 2000.
(d) Nieto-Roman, F.; Vors, J.-P.; Villier, A.; Lachaise, H.; Mousques,
A.; Hartmann, B.; Hutin, P.; Molina, J. L.; Muller, B. Preparation of
picolinic acid derivatives for agrochemical and therapeutic use as
fungicides. WO 2001049666, 2001. (e) Bacque, E.; Barriere, J.-C.;
Vors, J.-P.; Nieto-Roman, F.; Villier, A. Preparation of hydroxy-
picolinic acid derivatives for agrochemical and pharmaceutical use
as fungicides. WO 2001049667, 2001.
NaOH (1.0 N, 1.4 mL, 1.5 equiv) and the mixture was heated at
reflux for 0.5 h before being cooled and concentrated in vacuo.
The resulting oil was redissolved in water (10 mL) and neutralized
by the dropwise addition of HCl (1.0 N). The precipated white solid
was collected, washed with water, and dried in vacuo to give acid
26 (0.37 g, 89%): mp 67-68 °C; Rf 0.31 (silica, 80% ethyl acetate
1
in hexanes). H NMR (CDCl3) δ 7.81 (s, 1H), 6.01 (s, 2H), 5.63
(s, 1H), 3.92 (t, 2H), 3.65 (t, 2H), 0.98 (m, 4H), 0.02 (s, 9H), 0.00
(s, 9H). 13C NMR (CDCl3) δ 165.9, 150.4, 148.4, 123.6, 122.0,
118.4, 97.7, 83.4, 69.5, 69.0, 19.5, 19.3, 0.1, 0.0. IR 3800-2500,
2953, 1671 cm-1. MS 444.91 (M + H+), 443.06 (M - H+). Anal.
(C18H32N2O5SSi2) C, H, N.
(5) (a) Clough, J. M. The strobilurins, oudemansins, and myxothiazols,
fungicidal derivatives of â-methoxyacrylic acids. Nat. Prod. Rep.
1993, 10 (6), 565-574. (b) Sauter, H.; Steglich, W.; Anke, T.
Strobilurins: volution of a new class of active substances. Angew.
Chem., Int. Ed. 1999, 38 (10), 1329-1349.
(6) (a) Clough, J. M.; Godfrey, C. R. A.; Godwin, J. R.; Joseph, R. S.
I.; Spinks, C. Azoxystrobin: A novel broad-spectrum systemic
fungicide. Pesticide Outlook 1996, 7 (4), 16-20. (b) Clough, J. M.
The strobilurin fungicides - from mushroom to molecule to market.
Special Publication (Biodiversity); R. Soc. Chem. 2000, 257, 277-
282.
(7) Ypema, H. L.; Gold, R. E. Kresoxim - methyl: Modification of a
naturally occurring compound to produce a new fungicide. Plant Dis.
1999, 83 (1), 4-19.
(8) (a) Ohshima, T.; Komyoji, T.; Mitani, S.; Matsuo, N.; Nakajima, T.
Development of a novel fungicide, cyazofamid. J. Pestic. Sci. 2004,
29 (2), 147-152, 136-138. (b) Mitani, S.; Araki, S.; Takii, Y.;
Ohshima, T.; Matsuo, N.; Miyoshi, H. The biochemical mode of
action of the novel selective fungicide cyazofamid: specific inhibition
of mitochondrial complex III in Pythium spinosum. Pestic. Biochem.
Physiol. 2001, 71 (2), 107-115.
6-Hydroxy-1-[2-(trimethylsilanyl)ethoxymethyl]-1H-thieno-
[3,2-c]pyrazole-5-carboxylic Acid, 4-(4-Trifluoromethylphen-
oxy)phenyl Amide (27). To a solution of acid 26 (554 mg) in
pyridine (10 mL) were added HOBt (177 mg, 1.05 equiv), EDC
(311 mg, 1.3 equiv), and 4-(4-trifluoromethylphenoxy)aniline (347
mg, 1.2 equiv), and the mixture was heated at 85 °C for 2 h. The
mixture was then cooled, concentrated, diluted with 1 N HCl, and
twice extracted with methylene chloride. The organic phase was
dried (MgSO4), concentrated, and purified by flash chromatography
(silica gel, 20-40% ethyl acetate in hexane). The residue obtained
is dissolved in ethyl ether (3 mL) and precipitated with hexanes to
afford the amide 27 as an off white solid (90 mg, 13%): mp 158-
1
160 °C; Rf 0.56 (silica, 60% ethyl acetate in hexanes). H NMR
(CDCl3) δ 11.53 (br s, 1H), 7.80 (s, 1H), 7.63 (d, 2H), 7.60 (d,
2H), 7.40 (br s, 1H), 7.10 (d, 2H), 7.07 (d, 2H), 5.65 (s, 2H), 3.65
(t, 2H), 0.95 (t, 2H), 0.02 (s, 9H). 13C NMR (CDCl3) δ 154.0, 151.0,
135.0, 128.6 (q), 124.1, 122.1, 119.1, 83.3, 69.1, 19.3, 0.0. IR 3300,
2917, 1648 cm-1; MS 549.87 (M + H+), 547.99 (M - H+).
(9) Heaney, S. P.; Hall, A. A.; Davies, S. A.; Olaya, G. Resistance to
fungicides in the QoI-STAR cross- resistance group: current
perspectives. BCPC Conf. Pests Dis. 2000, 2, 755-762.
6-Hydroxy-1H-thieno[3,2-c]pyrazole-5-carboxylic Acid, 4-(4-
Trifluoromethylphenoxy)phenyl Amide (28). Compound 27 (89
mg) was dissolved in TFA (3 mL) and stirred for 20 min. Water (2
mL) is then added with ice-bath cooling. After stirring for a further
5 min, an additional 1 mL of water is added and the mixture is
stirred for an additional 15 min before being filtered and washed
with water to give a beige solid (65 mg). The solid is triturated
with methylene chloride to give clean indazole 28. The methylene
chloride extract is purified by flash chromatography (silica gel,
4080% ethyl acetate in hexane) to yield additional indazole 28 (26
mg total yield, 38%). mp 221-223 °C. Rf 0.09 (silica, ethyl
acetate): 1H NMR (acetone-d6) δ 12.12 (br s, 1H), 9.35 (s, 1H),
7.93 (s, 1H), 7.84 (d, 2H), 7.72 (9d, 2H), 7.17 (d, 2H), 7.15 (d,
2H). IR 3147, 2928, 1603 cm-1. HRMS Calcd. for C19H12N3O3F3S
(M + H+): 420.0630. Found: 420.0618.
(10) (a) Gao, X.; Wen, X.; Esser, L.; Quinn, B.; Yu, L.; Yu, C.-A.; Xia,
D. Structural basis for the quinone reduction in the bc1 complex: a
comparative analysis of crystal structures of mitochondrial cyto-
chrome bc1 with bound substrate and inhibitors at the Qi site.
Biochemistry 2003, 42 (30), 9067-9080. (b) Huang, L.-S.; Cobessi,
D.; Tung, E. Y.; Berry, E. A. Binding of the Respiratory Chain
Inhibitor Antimycin to the Mitochondrial bc1 Complex: A New
Crystal Structure Reveals an Altered Intramolecular Hydrogen-
bonding Pattern. J. Mol. Biol. 2005, 351 (3), 573-597.
(11) Kim, H.; Esser, L.; Hossain, M. B.; Xia, D.; Yu, C.-A.; Rizo, J.;
Van der Helm, D.; Deisenhofer, J. Structure of Antimycin A1, a
Specific Electron-Transfer Inhibitor of Ubiquinol-Cytochrome c
Oxidoreductase. J. Am. Chem. Soc. 1999, 121 (20), 4902-4903.
(12) (a) Tokutake, N.; Miyoshi, H.; Nakazato, H.; Iwamura, H. Inhibition
of electron transport of rat-liver mitochondria by synthesized anti-
mycin A analogues. Biochim. Biophys. Acta, Bioenerg. 1993, 1142
(3), 262-268. (b) Dickie, J. P.; Loomans, M. E.; Farley, T. M.;
Strong, F. M. The chemistry of antimycin A. XI. N-Substituted
3-formamidosalicylic amides. J. Med. Chem. 1963, 6 (4), 424-427.
(13) Tokutake, N.; Miyoshi, H.; Satoh, T.; Hatano, T.; Iwamura, H.
Structural factors of antimycin A molecule required for inhibitory
action. Biochim. Biophys. Acta, Bioenerg. 1994, 1185 (3), 271-278.
(14) (a) Bordwell, F. G. Equilibrium acidities in dimethyl sulfoxide
solution. Acc. Chem. Res. 1988, 21 (12), 456-463. (b) Catalan, J.;
Claramunt, R. M.; Elguero, J.; Laynez,.; Menendez, M.; Anvia, F.;
Quian, J. H.; Taagepera, M.; Taft, R. W. Basicity and acidity of
azoles: the annelation effect in azoles. J. Am. Chem. Soc. 1988, 110
(13), 4105-4111.
Acknowledgment. We thank Mike Wadsley for HRMS
analyses.
Supporting Information Available: Synthetic procedures,
analytical data for compounds 4, 5, 8, 10-12, 14-17, and 20-26,
and procedure for the characterization of bc1 binding by red-shift
titration. This material is available free of charge via the Internet
(15) Poupart, M.-A.; Beaulieu, P. L.; Rancourt, J. A preparation of
heterocyclic compounds, useful as inhibitors of RNA dependent RNA
polymerases, such as hepatitis C virus polymerase. WO 2004064925,
2004.
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