monohydrate (PLP·H2O, ≥97%), HCl standard solution (volu-
metric solution, 0.1 M), L-arginine monohydrochloride (reagent
grade, ≥98%), L-lysine monohydrochloride (reagent grade,
≥98%) and L-lysine dihydrochloride (≥98%) were bought from
Sigma–Aldrich. Quick Start Bradford dye reagent and Bovine
Serum Albumin standard set were from Bio-Rad. Other chemi-
cals were used as received. Milli-Q (Millipore) purity water was
used to make all the solutions.
determined at 595 nm using a Multiskan Spectrum microplate
spectrophotometer (Thermo Labsystem).
Immobilization
120 mg LDC powder was suspended in 12 mL sodium alginate
solution (2 wt %) The LDC suspension was added dropwise
in portions of 2 mL to 40 mL of CaCl2 solution (1 wt%) to
form calcium alginate beads with a diameter of approximately
1.5 mm. The beads were stored in sodium acetate buffer (10 mM,
pH 6.2) containing 50 mM CaCl2 and 10 mM PLP at 4 ◦C. The
samples were wrapped in aluminium foil to protect them from
light.
Software
The pH and charge behavior estimation was done by software
R
CurTiPot Version 3.3.2 (2008) for MS-Excelꢀ 1997–2007. The
software contains a database of dissociation constants.
Model fitting of operational stability data was done by
WinCurveFit 1.1.8. A double exponential model was used.
Activity assay
The initial rate of native LDC was assayed using a pH-stat
method as described in the literature.17 The titrations were
performed in a titration vessel with a thermostatic jacket
( 0.1 ◦C) and monitored using a Methrohm 718 STAT Titrino.
The substrate solution was prepared by dissolving 109.6 mg
Lys·HCl in 17.80 mL MilliQ water, after which 200 mL 5 mM
PLP·H2O solution was added.
U-HPLC
Sample preparation: 500 mL of sample (or standard 0.5–0.025
mM) was taken, put into an Eppendorf safe-lock tube and mixed
with 400 mL methanol. Subsequently, 100 mL internal standard
solution (0.4 mM taurine) was added to correct for injection
errors of the U-HPLC measurement. After this pre-treatment
the sample was filtered over a 0.2 mm filter (Spartan 13/0.2 RC,
Whatman) and placed in a 1.5 mL vial, to be ready for analysis.
The derivatization of the AA’s occurs in the needle of the Dionex
U-HPLC (Ultra High Pressure Liquid Chromatography). The
derivatization procedure is as follows; draw 50 mL ultra pure
water, draw 1 mL air, draw 2 mL reagent A (OPA-MET), draw
2 mL sample (or standard) solution, mix in needle 6¥, wait 60 s,
wash needle externally, draw 2 mL reagent B (FMOC), mix in
needle 6¥, wait 15 s, wash needle externally, draw 4 mL injection
diluent, mix in needle 6¥ and inject on column.
At 37 ◦C, the substrate solution was added to the titration
vessel and brought to the required pH using either HCl or NaOH
solution. To initiate the reaction, 1 mL LDC solution (20.0 mg
mL-1) was added to the substrate solution, resulting in a reaction
mixture with 30 mM Lys and 50 mM PLP. A solution of 0.1 M
HCl was used as titration solution. The initial rate, expressed as
U mg-1 (mmol H+ min-1 mg-1), was determined as the function
of the slope of the linear part of the titration curve.
To study the pH dependent activity, assays were performed at
pH 4.5, 5.0, 5.5, 5.8, 6.0, 6.5 and 7.0 at 37 ◦C. Similarly, to study
the KM value of Lys, activity assays were performed at 30 ◦C with
0.25, 0.50, 1.00, 5.00 and 30.00 mM of Lys. To study the Arg
and PDA inhibition at 30 ◦C, assays were performed with 0.50,
1.00, 2.00 and 30.00 mM of Lys in combination with 0, 15 and
30 mM of Arg·HCl or PDA·2HCl. Additionally, to investigate
the effect of Arg concentration, assays were performed with of
0.1, 0.2, 0.3 and 0.6 M Arg·HCl. Finally, to investigate the effect
of ionic strength, activity assays were performed with 0.03, 0.1,
0.2, and 1 M NaCl.
Chromatography: the analysis was performed by using a
Dionex U-HPLC instrument (Dionex Corporation, Sunnyvale,
CA, USA) consisting of a Ultimate 3000 RS (Rapid Separation)
pump and a Ultimate 3000 autosampler, a Ultimate 3000 column
compartment with a thermo stable column area, and a Ultimate
3000 variable wavelength detector, operating with the Dionex
ChromeleonTM 6.8 software.
R
The AA’s were separated using an Acquity UPLCꢀ BEH C18
reversed phase column (1.7 mm particle size, 2.1 ¥ 50 mm) and
R
a Acclaimꢀ 120 C18 guard column (5 mm, 2.0 ¥ 10 mm), flow
rate, 1 mL min-1. The column temperature was maintained at
65◦ C. Mobile phase A consisted of 10 mM sodium phosphate,
10 mM sodium borate and 2 mM sodium azide (buffer adjusted
with HCL to pH 7.8). Mobile phase B consisted of acetonitrile,
methanol and ultra pure water 45 : 45 : 10 (v/v). Detections were
performed simultaneously, by using the variable wavelength
detector at 338 nm and 263 nm (data collection rate: 4.0 Hz,
time constant 0.18 s).
Operational stability
The operational stability of native and immobilized enzyme was
det◦ermined by performing fed batch reactions at 30, 37 and
45 C over a period of 24 h. The reaction setup was similar to
that previously described in the Activity assay section.
The reaction vessel was filled with 20 mL 30 mM Lys·HCl and
50 mM PLP·H2O solution and subsequently the pH was adjusted
to 5.8 using a NaOH solution. At the required temperature,
20.0 mg LDC or an equivalent of immobilized enzyme was
added to initiate the reaction. The titration solution was an
aqueous solution of 0.1 M Lys·2HCl and 50 mM PLP·H2O
(50 mM). The activity (U mg-1) in time was determined as the
function of the tangent slope of the titration curve at given points
in time. The residual activity is defined as the activity at the given
point in time relative to the initial activity.
Gradient, expressed as % solvent B: 0–6.98 min: 2–57% B,
6.98–7.80 min: 57–100% B, 7.80–9.49 min: 100% B, 9.49–9.72
min: 100–2% B, 9.72–10 min 2% B.29
Bradford protein assay
Bradford protein assays were performed using the Bio-Rad
Protein Assay Kit II with BSA standard. The absorbance was
This journal is
The Royal Society of Chemistry 2011
Green Chem., 2011, 13, 624–630 | 629
©