The Journal of Organic Chemistry
Article
clohex-1-en-4-yl)methyl)-thymine (T-4b). The compound 3 (20
mg, 45 μmol) was dissolved in anhydrous N,N-dimethylformamide (2
mL) and thymine (34.0 mg, 0.27 mmol), and NaH (9.6 mg, 0.4 mmol)
was added at room temperature. The reaction was stirred at 150 °C for
24 h. The mixture was dissolved in EtOAc and H2O and washed with
brine twice. The organic layer was separated, dried over MgSO4, and
concentrated. The crude product was chromatographed over silica gel
(0−40% EtOAc in petroleum ether, v/v) to give compound 4 as a
colorless oil (11.1 mg, 52%) as a separable mixture of T-4a (5.5 mg,
26%) and T-4b (5.5 mg, 26%).
rearrangement mechanism of the trigonal bipyramidal inter-
mediate formed in the SN2 displacement−ring-opening reaction.
EXPERIMENTAL SECTION
■
General Procedures. All reagents were the highest commercial
quality and were used without further purification. All nonaqueous
reactions were carried out under anhydrous conditions in dry, freshly
distilled solvents under N2 (g). Reactions were monitored by TLC
carried out using UV light as visualizing agent and/or cerium−
ammonium−molybdate. Flash chromatography was performed using
T-4a: 1H NMR (500 MHz, CDCl3): δ 7.93 (1H, bs, NH), 7.12−7.21
(14H, m, aromatic), 7.12 (1H, d, J = 1 Hz, H6-T), 5.90 (1H, s, H3′), 5.47
(1H, dt, J1′,2′ = 10 Hz, JH2′, H7′ = 2.4, 4JH2′, H8′ = 1.83, H2′), 5.32 (1H, dt,
1
silica gel 60 (230−400 mesh). H and 13C NMR were obtained using
500 and 600 MHz instruments for 1H and 125 and 150 MHz for 13C.
The same spectrometers were used for the acquisition of the H−1H
1
J
1′,2′ = 10 Hz, JH1′, H8′ = 2.5, J1′,7′ = 2 Hz, H1′), 4.40 (1H, d, Jgem = 12 Hz,
homonuclear (COSY and nOe) and H−13C heteronuclear (HMQC
1
CH2Ph), 4.34 (1H, d, Jgem = 12 Hz, CH2Ph), 4.28 (2H, d, Jgem = 12 Hz,
CH2Ph), 3.39 (1H, d, Jgem = 9.5, H5′), 3.23 (1H, d, Jgem = 9.5, H5″), 2.33
(2H, m, H7′ & H8′), 2.03 (1H, dd, Jgem = 14.5, J6′,7′ = 5.5, H6′), 1.78
(3H, s, T-CH3), 1.21 (1H, dd, Jgem = 14.5, J6″,7′ = 10.7, H6″), 0.94 (3H, d,
J8′,Me = 7.5, 8′-CH3), 0.91 (3H, d, J 7′,Me = 6.6, 7′-CH3). 13C NMR (125
MHz): δ 163.2 (C4-T), 151.4 (C2-T), 138.0 (C6-T), 137.3, 136.6
(aromatic), 131.6 (C2′), 130.6 (C1′), 128.4, 128.3, 127.9, 127.6, 127.4,
127.2 (aromatic), 109.7 (C5-T), 87.6 (C3′), 74.9 (C5′), 73.3 (CH2Ph),
71.4 (CH2Ph), 45.2 (C4′), 35.6 (C8′), 35.1 (C6′), 28.4 (C7′), 22.2 (8′-
CH3), 15.4 (7′-CH3), 12.7 (T-CH3). MALDI-TOF m/z [M + Na]+
calcd for C29H34N2O4 Na 497.242, found 497.242.
and HMBC) correlations. Optical rotations were recorded on a
T
polarimeter, and values are reported as follows: [α]λ (c (g/100 mL),
solvent). The molecular modelings have been performed using
HyperChem Pro 6.018 using MM (AMBER) followed by the
Semiempirical (AM1) method (as implemented in HyperChem Pro.
6.0) to analyze the structures of all products reported in the Schemes.
The dihedral angles have been obtained using the Karplus equation19
through the coupling constants (NMR data) input, whereas Hyper-
Chem was used where no coupling constant could be obtained. High-
resolution mass spectra (HRMS) with correct masses have been
obtained by MALDI-TOF mass spectroscopy.
T-4b: 1H NMR (600 MHz, CDCl3): δ 8.08 (1H, bs, NH), 7.76 (1H,
d, J = 1.2 Hz, H6-T), 7.17−7.27 (14H, m, aromatic), 5.86 (1H, s, H3′),
(1S,2R,3S,4R,7R,8R)-3-(Benzyloxy)-4-[benzyloxymethyl]-1-
hydroxyl-8,7-dimethylbicyclo[2.2.1]heptane (2). Compound 1
(100 mg, 0.20 mmol) was dissolved in 6 mL of dichloromethane and 2%
of trifluoroacetic acid. The solution was stirred at rt for 2 h, and then it
was neutralized with 0.05 mL of Et3N. Solvent was evaporated, and the
concentrate was purified by silica gel column chromatography (0−15%
EtOAc in petroleum ether, v/v) to give compound 2 as a colorless oil
(50.2 mg, 71%).
4
5.51 (1H, dt, J1′,2′ = 10.2 Hz, JH2′, H7′ = 2.4, JH2′, H8′ = 2.4, H2′), 5.33
(1H, dt, J1′,2′ = 10.2 Hz, 3JH1′, H8′ = 2.4, J1′,7′ = 1.8 Hz, H1′), 4.47 (1H, d,
Jgem = 12 Hz, CH2Ph), 4.37 (2H, ABq, Jgem = 12 Hz, CH2Ph), 4.25 (2H,
d, Jgem = 12 Hz, CH2Ph), 4.06 (1H, d, Jgem = 9 Hz, H5′), 3.18 (1H, d, Jgem
= 9 Hz, H5″), 2.14 (1H, m, H8′), 1.9 (1H, m, H7′), 1.88 (1H, dd, Jgem
=
13.8, J6′,7′ = 6.6, H6′), 1.36 (3H, s, T-CH3), 1.13 (1H, dd, Jgem = 13.8,
1H NMR (500 MHz, CDCl3): δ 7.18−7.23 (10H, m, aromatic), 4.38
(3H, ABq, Jgem = 12 Hz, CH2Ph), 4.27 (1H, d, Jgem = 12 Hz, CH2Ph),
3.61 (1H, m, H1), 3.49 (1H, d, Jgem = 9 Hz, H5), 3.41 (1H, d, Jgem = 9 Hz,
J
6″,7′ = 7.8, H6″), 0.97 (3H, d, JH8′,Me = 7.8 Hz, 8′-CH3), 0.91 (3H, d, J
H7′,Me = 6.5 Hz, 7′-CH3). 13C NMR (150 MHz): δ 163.2 (C4-T), 152.4
(C2-T), 139.4 (C6-T), 132.2 (C2′), 129.5 (C1′), 132.2, 129.5, 128.4,
127.9, 127.8, 127.6, 127.5 (aromatic), 109.5 (C5-T), 86.5 (C3′), 73.5
(CH2Ph), 73.3 (C5′), 70.7 (CH2Ph), 45.7 (C4′), 36.2 (C8′), 34.3
(C6′), 27.1 (C7′), 22.2 (7′-CH3), 16.4 (8′-CH3), 11.9 (T-CH3).
MALDI-TOF m/z [M+Na]+ calcd for C29H34N2O4 Na 497.242, found
497.243.
9-((4R,7R,8S)-(S)-Benzyloxy-(4-benzyloxymethyl-7,8-dime-
thylcyclohex-1-en-4-yl)methyl)-adenine (A-5a) and 9-
((4R,7R,8S)-(R)-Benzyloxy-(4-benzyloxymethyl-7,8-dimethylcy-
clohex-1-en-4-yl)methyl)-adenine. Compound 3 (20 mg, 45 μmol)
was dissolved in anhydrous N,N-dimethylformamide (2 mL) and
adenine (36.0 mg, 0.27 mmol), and NaH (9.6 mg, 0.4 mmol) was added
at room temperature. The reaction was stirred at 150 °C for 24 h. The
mixture was dissolved in EtOAc and H2O and washed with brine twice.
The organic layer was separated, dried over MgSO4, and concentrated.
The crude product was chromatographed over silica gel (0−70% EtOAc
in petroleum ether, v/v) to give compound 5 as a colorless oil (10.9 mg,
50%) as a separable mixture of A-5a (5.45 mg, 25%) and A-5b (5.45 mg,
25%).
H5′), 3.40 (1H, d, J3,2 = 3.5 Hz, H3), 2.46 (1H, m, H7), 2.20 (1H, t, J1,2
3 Hz, J2,3 = 3.5 Hz, H2), 2.11 (1H, t, Jgem = 11.5 Hz, H6), 1.48 (1H, m,
H8), 1.23 (3H, d, J = 7.5 Hz, 7-CH3), 1.13 (1H, dd, Jgem = 12 Hz, J6,7
=
=
5.5 Hz, H6′), 0.94 (3H, d, J = 7.0 Hz, 8-CH3). 13C NMR (125 MHz): δ
138.8, 128.3, 128.2, 127.5, 127.4, 127.1 (aromatic), 84.0 (C3), 81.1
(C1), 73.4 (CH2Ph), 71.2 (CH2Ph), 70.8 (C5), 53.5 (C4), 48.7 (C2),
47.3 (C8), 42.1 (C6), 31.2 (C7), 18.4 (7-CH3), 13.6 (8-CH3). MALDI-
TOF m/z [M + Na]+ calcd for C24H30O3 Na 389.209, found 389.208.
(1S,2R,3S,4R,7R,8R)-3-(Benzyloxy)-4-[benzyloxymethyl]-1-
mesyloxy-8,7-dimethylbicyclo[2.2.1]heptane (3). Compound 2
(50 mg, 0.14 mmol) was dissolved in dry pyridine (2 mL).
Methanosulfonyl chloride (16.2 μL, 0.21 mmol) was added at 0 °C.
The reaction was stirred at room temperature for 1 h. The reaction
mixture was partitioned between EtOAc and H2O. The organic layer was
washed with brine twice and dried over MgSO4, filtered, and
concentrated.
The concentrate was purified by silica gel column chromatography
(0−10% EtOAc/petroleum ether, v/v) to give 3 as a colorless oil (53
mg, 82%).
A-5a: 1H NMR (500 MHz, CDCl3): δ 8.29 (1H, s, H2-A), 7.96 (1H,
s, H8-A), 7.01−7.20 (15H, m, aromatic), 5.98 (1H, s, H3′), 5.69 (2H, bs,
NH2), 5.51 (1H, dt, J1′,2′ = 10.38, Hz, J2′,8′ = 1.58 Hz, J2′,7′ = 1.89 Hz,
H2′), 5.37 (1H, dt, J1′,2′ = 10.38 Hz, J1′,7′ = 1.89 Hz, J1′,8′ = 2.21 Hz, H1′),
4.30 (1H, d, Jgem = 11.5 Hz, CH2Ph), 4.26 (1H, d, Jgem = 11.5 Hz,
CH2Ph), 4.16 (1H, d, Jgem = 12 Hz, CH2Ph), 4.03 (1H, d, Jgem = 12 Hz,
CH2Ph), 3.23 (2H, s, H5′, H5″), 2.51 (2H, m, H7′ & H8′), 2.03 (1H,
dd, Jgem = 14.5, J6′,7′ = 4.5, 4J2′,6′ = 1.5, H6′), 1.25 (1H, H6″), 0.91 (6H, t,
J8′,Me = 8, J7′,Me = 6.6, 8′-CH3, 7′-CH3). 13C NMR (125 MHz): δ 155.2
(C6-A), 152.6 (C2-A), 140.9 (C8-A), 138.3, 136.9 (aromatic), 132.2
(C2′), 131.3 (C1′), 128.6, 127.9, 127.7, 127.1, 127.6, 127.2 (aromatic),
87.6 (C3′), 75.2 (C5′), 73.7 (CH2Ph), 71.5 (CH2Ph), 45.5 (C4′), 36.0
(C6′), 35.6 (C8′), 30.0 (C7′), 28.6 (7′-CH3), 15.9 (8′-CH3). MALDI-
TOF m/z [M + H]+ calcd for C29H34N5O2 484.271, found 484.271.
A-5b :1H NMR (500 MHz, CDCl3): δ 8.58 (1H, s, H8-A), 8.30 (1H,
s, H2-A), 7.15−7.22 (15H, m, aromatic), 6.16 (2H, bs, NH2), 5.97 (1H,
1H NMR (600 MHz, CDCl3): δ 7.18−7.24 (15H, m, aromatic), 4.37
(3H, m, Jgem = 12 Hz, CH2Ph, H1), 4.27 (1H, d, Jgem = 12 Hz, CH2Ph),
3.47 (1H, bs, J2,3 ≈ 3 Hz, H3), 3.48 (1H, d, Jgem = 9 Hz, H5), 3.41 (1H, d,
Jgem = 9 Hz, H5′), 2.93 (3H, s, Me), 2.53 (1H, m, H7), 2.50 (1H, t, H2),
2.12 (1H, t, Jgem = 11.4 Hz, H6), 1.80 (1H, t, J1,8 = 5.4 Hz, H8), 1.18 (3H,
d, J = 7.2 Hz, 7-CH3), 1.14 (1H, dd, Jgem = 12 Hz, J6′,7 = 6.6 Hz, H6′),
0.99 (3H, d, J = 7.2 Hz, 8-CH3). 13C NMR (150 MHz): δ 138.9, 138.6,
128.8, 128.7, 128.0, 127.9, 127.6 (aromatic), 87.9 (C1), 83.3 (C3), 73.8
(CH2Ph), 71.8 (CH2Ph), 70.6 (C5), 53.5 (C4), 48.1 (C2), 44.9 (C8),
42.0 (C6), 38.6 (CH3-Ms), 31.4 (C7), 18.3 (7-CH3), 16.7 (8-CH3).
MALDI-TOF m/z [M + Na]+ calcd for C25H32O5 SNa 467.187, found
467.188.
1-((4R,7R,8S)-(S)-Benzyloxy-(4-benzyloxymethyl-7,8-dime-
thylcyclohex-1-en-4-yl)methyl)-thymine (T-4a) and 1-
((4R,7R,8S)-(R)-Benzyloxy-(4-benzyloxymethyl-7,8-dimethylcy-
9754
dx.doi.org/10.1021/jo301871d | J. Org. Chem. 2012, 77, 9747−9755