Journal of Medicinal Chemistry
Article
7.0 Hz, 2H), 3.28 (t, J = 7.2 Hz, 2H), 3.24 (s, 3H). 13C NMR (100
MHz, DMSO-d6) δ 172.1 (CO), 171.9 (CO), 154.1 (C), 146.9
(CH), 136.0 (CH), 134.9 (C), 132.4 (C), 126.9 (C), 125.5 (C), 124.7
(CH), 124.5 (CH), 123.3 (C), 122.7 (CH), 122.4 (C), 121.7 (CH),
120.1 (CH), 119.0 (CH), 111.6 (C), 111.3 (CH), 103.5 (C), 73.3
(CH2), 58.0 (CH3), 37.2 (CH3), 31.5 (CH2). HRMS (ESI): m/z [M +
H]+ calculated for C24H21N2O4, 401.1496; found, 401.1510. HPLC
purity: 98.1%.
3-(Benzofuran-3-yl)-4-(7-(2-(tert-butoxy)ethyl)-1-methyl-1H-
indol-3-yl)-1H-pyrrole-2,5-dione (22). The title compound was
synthesized from alcohol 40a (generated from indole-7-carboxalde-
hyde 39 employing general methods E and F) and tert-butyl 2,2,2-
trichloroacetimidate (method G) according to general procedures A−
C, purified using gradient I preparative HPLC, and isolated as an
orange solid in 16% yield over 3 steps; mp 107−112 °C. IR (ATR):
νmax 3211, 2971, 1704, 1699, 1545, 1451, 1322, 1106, 1077, 743 cm−1.
1H NMR (400 MHz, DMSO-d6) δ 11.16 (s, 1H), 8.22 (s, 1H), 7.85 (s,
steps; mp 152−157 °C. IR (ATR): νmax 3136, 3050, 2738, 1710, 1670,
1547, 1452, 1340, 1181, 1120, 746 cm−1. 1H NMR (400 MHz,
DMSO-d6) δ 11.29 (s, 1H), 9.65 (br s, 2H), 8.30 (s, 1H), 7.99 (s, 1H),
7.63 (d, J = 8.4 Hz, 1H), 7.27 (t, J = 7.6 Hz, 1H), 7.04−6.94 (m, 2H),
6.90 (d, J = 7.6 Hz, 1H), 6.63 (d, J = 9.2 Hz, 1H), 4.66 (br s, 4H), 3.71
(br s, 2H). 13C NMR (100 MHz, DMSO-d6) δ 171.9 (CO), 171.6
(CO), 158.2 (q, 2JC−F = 36.1 Hz, TFA), 156.6 (d, 1JC−F = 233.4 Hz,
C), 154.2 (C), 147.4 (CH), 135.9 (CH), 132.1 (C), 131.6 (C), 127.5
3
(d, JC−F = 10.6 Hz, C), 125.1 (C), 125.0 (CH), 124.2 (C), 123.0
3
1
(CH), 121.6 (CH), 119.8 (d, JC−F = 9.6 Hz, C), 117.3 (d, JC−F
=
2
298.2 Hz, TFA), 111.6 (CH), 111.1 (C), 110.9 (d, JC−F = 27 Hz,
2
4
CH), 105.9 (d, JC−F = 24.4 Hz, CH), 105.1 (d, JC−F = 4.4 Hz, C),
46.7 (CH2), 46.6 (CH2), 45.6 (CH2). HRMS (ESI): m/z [M + H]+
calculated for C23H17FN3O3, 402.1248; found, 402.1260. HPLC
purity: 97.9%.
3-(Benzofuran-3-yl)-4-(9-bromo-1,2,3,4-tetrahydro-[1,4]-
diazepino[6,7,1-hi]indol-7-yl)-1H-pyrrole-2,5-dione Trifluoroa-
cetate (26). The title compound was synthesized from 5-bromoindo-
line 45 (see Supporting Information), purified using gradient II
preparative HPLC, and isolated as an orange solid; mp 243−248 °C.
IR (ATR): νmax 3138, 3050, 1709, 1700, 1695, 1623, 1545, 1336, 1179,
746 cm−1. 1H NMR (400 MHz, DMSO-d6) δ 11.29 (s, 1H), 9.55 (br s,
2H), 8.31 (s, 1H), 7.96 (s, 1H), 7.65 (d, J = 7.8 Hz, 1H), 7.30−7.25
(m, 2H), 7.08 (s, 1H), 6.99 (t, J = 7.6 Hz, 1H), 6.88 (d, J = 8.8 Hz,
1H), 4.66 (br s, 4H), 3.70 (br s, 2H). 13C NMR (100 MHz, DMSO-
d6) δ 171.8 (CO), 171.5 (CO), 158.2 (q, 2JC−F = 30.9 Hz, TFA),
154.4 (C), 147.4 (CH), 135.4 (CH), 134.1 (C), 131.5 (C), 128.4 (C),
125.0 (CH), 124.9 (C), 124.9 (CH), 124.6 (C), 123.6 (CH), 123.0
1H), 7.58 (d, J = 8.4 Hz, 1H), 7.24−7.18 (m, 1H), 6.93−6.88 (m,
2H), 6.85 (d, J = 7.6 Hz, 1H), 6.71 (dd, J = 8.0, 1.0 Hz, 1H), 6.61 (t, J
= 7.6 Hz, 1H), 4.12 (s, 3H), 3.55 (t, J = 7.0 Hz, 2H), 3.18 (t, J = 6.8
Hz, 2H), 1.06 (s, 9H). 13C NMR (100 MHz, DMSO-d6) δ 172.2 (C
O), 171.9 (CO), 154.1 (C), 146.9 (CH), 136.0 (CH), 135.0 (C),
132.4 (C), 126.9 (C), 125.5 (C), 124.7 (CH), 124.6 (CH), 123.7 (C),
122.7 (CH), 122.2 (C), 121.7 (CH), 120.1 (CH), 119.0 (CH), 111.5
(C), 111.3 (CH), 103.5 (C), 72.3 (CH2), 62.9 (C), 37.1 (CH3), 32.6
(CH2), 27.2 (CH3). HRMS (ESI): m/z [M + H]+ calculated for
C27H27N2O4, 443.1965; found, 443.1983. HPLC purity: 96.9%.
3-(Benzofuran-3-yl)-4-(1,7-bis(2-methoxyethyl)-1H-indol-3-
yl)-1H-pyrrole-2,5-dione (23). The title compound was synthesized
from alcohol 40b (generated from indole-7-carboxaldehyde 39
employing general methods E and F) and 2-bromoethyl methyl
ether according to general procedures A−C, purified using gradient I
preparative HPLC, and isolated as an orange solid in 16% yield over 3
steps; mp 178−182 °C. IR (ATR): νmax 3146, 2892, 1697, 1559, 1337,
1
(CH), 121.6 (CH), 120.1 (C), 116.3 (d, JC−F = 294.3 Hz, TFA),
112.5 (C), 111.5 (CH), 111.1 (C), 104.6 (C), 46.5 (CH2), 46.3
(CH2), 45.3 (CH2). HRMS (ESI): m/z [M + H]+ calculated for
C23H17BrN3O3, 462.0448; found, 462.0448. HPLC purity: 98.9%.
3-(Benzofuran-3-yl)-4-(9-fluoro-2-(2-(pyridin-4-yl)acetyl)-
1,2,3,4-tetrahydro-[1,4]diazepino[6,7,1-hi]indol-7-yl)-1H-pyr-
role-2,5-dione (27). The title compound was synthesized from
maleimide 24 and pyrazine-2-carboxylic acid according to general
procedure H, purified using gradient II preparative HPLC, and isolated
as an orange solid (30%); mp 167−172 °C. IR (ATR): νmax 3138,
1
1109, 747 cm−1. H NMR (400 MHz, DMSO-d6) δ 11.19 (s, 1H),
8.29 (s, 1H), 7.78 (s, 1H), 7.57 (d, J = 8.4 Hz, 1H), 7.20 (t, J = 7.6 Hz,
1H), 6.89−6.81 (m, 3H), 6.77 (d, J = 8.0 Hz, 1H), 6.67 (t, J = 7.6 Hz,
1H), 4.55 (t, J = 5.0 Hz, 2H), 3.63−3.54 (m, 4H), 3.25−3.15 (m, 8H).
13C NMR (100 MHz, DMSO-d6) δ 172.0 (CO), 171.8 (CO),
1
3053, 1708, 1627, 1545, 1451, 1332, 1017, 744 cm−1. H NMR (400
MHz, DMSO-d6, two rotamers observed) δ 11.22 (s, 1H), 11.21 (s,
1H), 8.87 (d, J = 1.5 Hz, 1H), 8.77 (d, J = 2.5 Hz, 1H), 8.75 (d, J = 2.5
Hz, 1H), 8.69 (dd, J = 2.5, 1.5 Hz, 1H), 8.66 (dd, J = 2.5, 1.5 Hz, 1H),
8.59 (d, J = 1.5 Hz, 1H), 8.25 (s, 2H), 7.96 (s, 1H), 7.85 (s, 1H), 7.61
(s, 1H), 7.59 (s, 1H), 7.27−7.21 (m, 2H), 7.03 (d, J = 6.8 Hz, 1H),
6.97−6.93 (m, 4H), 6.82−6.69 (m, 3H), 6.60 (t, J = 7.6 Hz, 1H), 6.52
(d, J = 6.8 Hz, 1H), 5.17 (s, 2H), 4.98 (s, 2H), 4.73−4.69 (m, 2H),
4.61−4.57 (m, 2H), 4.23−4.18 (m, 2H), 4.10−4.05 (m, 2H). 13C
NMR (100 MHz, DMSO-d6, two rotamers observed) δ 172.0 (C
O), 171.8 (CO), 166.1 (CO), 165.9 (CO), 154.2 (C), 149.3
(C), 149.2 (C), 147.2 (CH), 145.7 (CH), 145.6 (CH), 144.6 (CH),
143.8 (CH), 143.2 (CH), 143.0 (CH), 135.6 (C), 135.2 (C), 134.4
(CH), 134.3 (CH), 132.2 (C), 126.7 (C), 125.3 (C), 125.3 (C), 124.8
(CH), 123.3 (C), 123.3 (C), 123.2 (C), 122.8 (CH), 121.8 (CH),
121.7 (CH), 120.6 (CH), 120.3 (CH), 120.1 (CH), 120.0 (CH),
111.4 (CH), 104.7 (C), 104.5 (C), 50.3 (CH2), 50.1 (CH2), 48.7
(CH2), 47.3 (CH2), 46.9 (CH2), 40.5 (CH2). HRMS (ESI): m/z [M +
H]+ calculated for C28H20N5O4, 490.1510; found, 490.1523. HPLC
purity: 98.2%.
154.1 (C), 147.1 (CH), 135.1 (CH), 134.2 (C), 132.2 (C), 127.3 (C),
125.2 (C), 124.8 (CH), 124.7 (CH), 123.4 (C), 122.8 (C), 122.6
(CH), 121.7 (CH), 120.1 (CH), 119.2 (CH), 111.4 (CH), 111.3 (C),
104.3 (C), 72.8 (CH2), 71.7 (CH2), 58.3 (CH3), 58.1 (CH3), 48.2
(CH2), 32.0 (CH2). HRMS (ESI): m/z [M + H]+ calculated for
C26H25N2O5, 445.1758; found, 445.1777. HPLC purity: 99.4%.
3-(Benzofuran-3-yl)-4-(1,2,3,4-tetrahydro-[1,4]diazepino-
[6,7,1-hi]indol-7-yl)-1H-pyrrole-2,5-dione Tifluoroacetate (24).
The title compound was synthesized from diazepinoindole 43a
(generated from indole-7-carboxaldehyde 39) according to general
procedures B−D, purified using gradient II preparative HPLC, and
isolated as an orange solid in 12% yield over 3 steps; mp 160−165 °C.
IR (ATR): νmax 3038, 2731, 1706, 1695, 1669, 1545, 1451, 1340, 1180,
1
1116, 745 cm−1. H NMR (400 MHz, DMSO-d6) δ 11.26 (s, 1H),
9.44 (br s, 2H), 8.26 (s, 1H), 7.97 (s, 1H), 7.61 (d, J = 8.4 Hz, 1H),
7.25 (t, J = 8.0 Hz, 1H), 7.05 (d, J = 7.2 Hz, 1H), 7.02−6.86 (m, 3H),
6.77 (t, J = 8.0 Hz, 1H), 4.68 (br s, 4H), 3.72 (br s, 2H). 13C NMR
(100 MHz, DMSO-d6) δ 172.0 (CO), 171.7 (CO), 158.2 (q,
2JC−F = 36.1 Hz, TFA), 154.2 (C), 147.3 (CH), 135.3 (C), 134.4
3-(Benzofuran-3-yl)-4-(9-fluoro-2-(2-(pyridin-4-yl)acetyl)-
1,2,3,4-tetrahydro-[1,4]diazepino[6,7,1-hi]indol-7-yl)-1H-pyr-
role-2,5-dione Trifluoroacetate (28). The title compound was
synthesized from maleimide 24 and 2-(pyridin-4-yl)acetic acid
according to general procedure H, purified using gradient II
preparative HPLC, and isolated as an orange solid (30%); mp 142−
147 °C. IR (ATR): νm1ax 3063, 2725, 1711, 1645, 1548, 1451, 1338,
1180, 1127, 748 cm−1. H NMR (400 MHz, DMSO-d6, two rotamers
observed) δ 11.23 (s, 1H), 11.23 (s, 1H), 8.80 (s, 1H), 8.78 (s, 1H),
8.72 (s, 1H), 8.71 (s, 1H), 8.25 (s, 1H), 8.22 (s, 1H), 7.99 (s, 1H),
7.90 (s, 1H), 7.82 (s, 1H), 7.81 (s, 1H), 7.71 (s, 1H), 7.70 (s, 1H),
7.61 (s, 1H), 7.59 (s, 1H), 7.29−7.21 (m, 2H), 7.05−6.60 (m, 12H),
(CH), 131.9 (C), 126.8 (C), 125.3 (C), 124.9 (CH), 123.9 (C), 122.9
(CH), 122.8 (CH), 121.8 (CH), 121.3 (CH), 120.5 (CH), 118.0 (C),
117.2 (d, 1JC−F = 298.2 Hz, TFA), 111.5 (CH), 111.3 (C), 104.9 (C),
46.9 (CH2), 46.6 (CH2), 45.2 (CH2). HRMS (ESI): m/z [M + H]+
calculated for C23H18N3O3, 384.1343; found, 384.1362. HPLC purity:
98.2%.
3-(Benzofuran-3-yl)-4-(9-fluoro-1,2,3,4-tetrahydro-[1,4]-
diazepino[6,7,1-hi]indol-7-yl)-1H-pyrrole-2,5-dione Trifluoroa-
cetate (25). The title compound was synthesized from diazepinoin-
dole 43b (generated from 5-fluoroindole-7-carboxaldehyde 42)34
according to general procedures B−D, purified using gradient II
preparative HPLC, and isolated as an orange solid in 14% yield over 3
5126
dx.doi.org/10.1021/jm400511s | J. Med. Chem. 2013, 56, 5115−5129