J. R. Pruitt et al. / Bioorg. Med. Chem. Lett. 17 (2007) 2992–2997
2997
generating system. The model substrate 3-[2-(N,N-diethyl-
N-methylamino)-ethyl]-7-methoxy-4-methylcoumarin was
used at a single concentration (approximately the appar-
ent Km), with production of 3-[2-(N,N-diethylami-
no)ethyl]-7-hydroxy-4-methylcoumarin monitored by
fluorescence detection. Multiple concentrations of inhib-
itor, separated by half-log units, were evaluated in
duplicate and the IC50 was determined. Quinidine served
as a positive control.
References and notes
1. Carter, P. H. Curr. Opin. Chem. Biol. 2002, 6, 510.
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16. Ingelman-Sundberg, M. Pharmacogenomics J. 2005, 5, 6.
17. Lipophilic alkaloids such as quinidine are well-known
inhibitors of CYP2D6. See, for example, Ref. 18, and
McLaughlin, L. A.; Paine, M. J. I.; Kemp, Carol A.;
4. Lilly, C. M.; Woodruff, P. G.; Camargo, C. A., Jr.;
Nakamura, H.; Drazen, J. M.; Nadel, E. S.; Hanrahan, J.
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´
Marechal, J.; Flanagan, J. U.; Ward, C. J.; Sutcliffe, M. J.;
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Shen, H. H.; Ochkur, S. I.; McGarry, M. P.; Lee, N. A.;
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18. Compounds 4 and 5 were prepared from the correspond-
ing Boc-protected aminoaldehydes, using the route
described in Ref. 11. Briefly, synthesis of the aldehydes
involved establishment of the chirality via stereospecific
aldol condensations, with ring closure achieved by intra-
molecular alkylation of the resulting alcohols. See Ref. 19
for details.
19. Details of the synthetic steps described may be found in
Ko, S. S.; Pruitt, J. R.; Wacker, D. A.; Batt, D. G. PCT
Int. Appl. 2002/002525, 2002 U.S. Patent 6,627,629, 2003;
Chem. Abstr. 2002, 136, 102384.
20. Known b-ketoester starting materials: (a) methyl Boc-4-
piperidone-3-carboxylate Christoffers, J.; Scharl, H. Eur.
J. Org. Chem. 2002, 1505; Methyl Boc-3-piperidone-4-
carboxylate (b) Knight, D. W.; Lewis, N.; Share, A. C.;
Haigh, D. J. Chem. Soc., Perkin Trans. 1 1998, 3673;
Pyrrolidine (c) Wang, X.; Espinosa, J. F.; Gellman, S. H.
J. Amer. Chem. Soc. 2000, 122, 4821; Tetrahydrothioph-
ene (d) Hromatka, O.; Binder, D.; Eichinger, K. Monatsh.
Chem. 1973, 104, 1520.
21. The ketoester precursor to 6 was prepared in three steps
from c-butyrolactone: ethanolysis, rhodium-catalyzed
alkylation of the alcohol with ethyl diazoacetate, and
Dieckmann cyclization. See Ref. 19 for details.
22. Cimarelli, C.; Palmieri, G. J. Org. Chem. 1996, 61, 5557.
23. The clogD7.4 values were calculated using the ACD/logD
Suite, version 9.0, Advanced Chemistry Development,
24. The lack of correlation between receptor antagonism and
chemotaxis inhibition has been seen previously. It has
been hypothesized that increased flexibility (expected from
the five-membered ring of 10, relative to 7 and 8) can
contribute to this disparity. See Batt, D. G.; Houghton, G.
C.; Roderick, J.; Santella, J. B., III; Wacker, D. A.; Welch,
P. K.; Orlovsky, Y. I.; Wadman, E. A.; Trzaskos, J. M.;
Davies, P.; Decicco, C. P.; Carter, P. H. Bioorg. Med.
Chem. Lett. 2005, 15, 787.
8. Wacker, D. A.; Santella, J. B., III; Gardner, D. S.; Varnes,
J. G.; Estrella, M.; De Lucca, G. V.; Ko, S. S.; Tanabe, K.;
Watson, P. S.; Welch, P. K.; Covington, M.; Stowell, N.
C.; Wadman, E. A.; Davies, P.; Solomon, K. A.; Newton,
R. C.; Trainor, G. L.; Friedman, S. M.; Decicco, C. P.;
Duncia, J. V. Bioorg. Med. Chem. Lett. 2002, 12, 1785.
9. De Lucca, G. V.; Kim, U. T.; Johnson, C.; Vargo, B. J.;
Welch, P. K.; Covington, M.; Davies, P.; Solomon, K. A.;
Newton, R. C.; Trainor, G. L.; Decicco, C. P.; Ko, S. S.
J. Med. Chem. 2002, 45, 3794.
10. Varnes, J. G.; Gardner, D. S.; Santella, J. B., III; Duncia,
J. V.; Estrella, M.; Watson, P. S.; Clark, C. M.; Ko, S. S.;
Welch, P.; Covington, M.; Stowell, N.; Wadman, E.;
Davies, P.; Solomon, K.; Newton, R. C.; Trainor, G. L.;
Decicco, C. P.; Wacker, D. A. Bioorg. Med. Chem. Lett.
2004, 14, 1645.
11. De Lucca, G. V.; Kim, U. T.; Vargo, B. J.; Duncia, J. V.;
Santella, J. B., III; Gardner, D. S.; Zheng, C.; Liauw, A.;
Wang, Z.; Emmett, G.; Wacker, D. A.; Welch, P. K.;
Covington, M.; Stowell, N. C.; Wadman, E. A.; Das, A.
M.; Davies, P.; Yeleswaram, S.; Graden, D. M.; Solomon,
K. A.; Newton, R. C.; Trainor, G. L.; Decicco, C. P.; Ko,
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12. The CCR3 binding assay was carried out using 125I-
labeled human eotaxin and CHO cells stably transfected
with a gene encoding human CCR3 as described in Ref. 9.
In some cases cells stably transfected with a chimeric
receptor, consisting of the intracellular domain of human
CCR2 with the extracellular and transmembrane domains
of human CCR3, were used. This variation was found to
give results nearly identical to those obtained using the
native CCR3 receptor; details will be published in due
course. The value reported represents the average of
duplicate determinations.
25. Das, A. M.; Vaddi, K. G.; Solomon, K. A.; Krauthauser,
C.; Jiang, X.; McIntyre, K. W.; Yang, X. X.; Wadman, E.;
Welch, P.; Covington, M.; Graden, D.; Yeleswaram, K.;
Trzaskos, J. M.; Newton, R. C.; Mandlekar, S.; Ko, S. S.;
Carter, P. H.; Davies, P. J. Pharmacol. Exp. Ther. 2006,
318, 411.
13. The chemotaxis assay was carried out using eotaxin and
human eosinophils in 96-well chemotaxis chambers, as
described in Ref. 9.
14. Inhibition of CYP2D6 was evaluated using recombinant
human enzyme (prepared from baculovirus-infected insect
cells) in 96-well plates in the presence of an NADPH